/* light atom ( H, He, Li, Be, B, C, N, O, F, Ne ) */ /* jellium core - all electron - real space DFT-LDA */ /* coded by Ikeuchi Mitsuru */ /* ver 0.0.1 2004.10.29 */ import java.awt.*; import java.awt.event.*; import java.applet.*; public class lightAtomJCAE extends Applet implements MouseListener, MouseMotionListener, ItemListener, ActionListener, AdjustmentListener, Runnable { /* -------------------------------------- set global ------ */ Choice cvw, ch_md, ch_noe; Button bt_reset, bt_start, bt_stop; Scrollbar spx,spy,spz; Thread th = null; Dimension dim; Image imgOff; Graphics gOff; int sleepTime = 30; int dispMode = 1; int dispObj = 0; double px0 = 0.0; double py0 = 0.0; double pz0 = 0.0; int started = 1; double NOE = 5.5; double Znuc = 6.0; int dgX, dgY, dgXb,dgYb; double viewTheta = -15.0*3.14/180.0; double viewFai = -72.0*3.14/180.0; double dtheta = 0.0*3.14/180.0; double pai = 3.1415926536; double cosTh = Math.cos(viewTheta); double sinTh = Math.sin(viewTheta); double cosFi = Math.cos(viewFai); double sinFi = Math.sin(viewFai); double t = 0.0; double dx = 1.0/4.0; double dy = 1.0/4.0; double dz = 1.0/4.0; double dt = 1.0*(dx*dx); int NNx = 64+1; int NNy = 64+1; int NNz = 64+1; int NN = NNx+1; /* max(NNx,NNy,NNz)+1 */ /* int NNr = 500;*/ double vv[][][] = new double[NNx][NNy][NNz]; double vvext[][][] = new double[NNx][NNy][NNz]; double vvh[][][] = new double[NNx][NNy][NNz]; double vvx[][][] = new double[NNx][NNy][NNz]; double vvc[][][] = new double[NNx][NNy][NNz]; double rho[][][] = new double[NNx][NNy][NNz]; double sdEnergy[] = new double[20]; double sdState[][][][] = new double[20][NNx][NNy][NNz]; double occ[] = new double[20]; double occupation[][] = { { 0.5, 0.0, 0.0 , 0.0 , 0.0 }, { 1.0, 0.0, 0.0 , 0.0 , 0.0 }, { 1.5, 0.0, 0.0 , 0.0 , 0.0 }, { 2.0, 0.0, 0.0 , 0.0 , 0.0 }, { 2.0, 0.5, 0.0 , 0.0 , 0.0 }, { 2.0, 1.0, 0.0 , 0.0 , 0.0 }, { 2.0, 1.5, 0.0 , 0.0 , 0.0 }, { 2.0, 2.0, 0.0 , 0.0 , 0.0 }, { 2.0, 2.0, 0.166667, 0.166667, 0.166667 }, { 2.0, 2.0, 0.333333, 0.333333, 0.333333 }, { 2.0, 2.0, 0.5 , 0.5 , 0.5 }, { 2.0, 2.0, 0.666667, 0.666667, 0.666667 }, { 2.0, 2.0, 0.833333, 0.833333, 0.833333 }, { 2.0, 2.0, 1.0 , 1.0 , 1.0 }, { 2.0, 2.0, 1.166667, 1.166667, 1.166667 }, { 2.0, 2.0, 1.333333, 1.333333, 1.333333 }, { 2.0, 2.0, 1.5 , 1.5 , 1.5 }, { 2.0, 2.0, 1.666667, 1.666667, 1.666667 }, { 2.0, 2.0, 1.833333, 1.833333, 1.833333 }, { 2.0, 2.0, 2.0 , 2.0 , 2.0 } }; int pxBox[] = new int[8]; int pyBox[] = new int[8]; int boxp[][] = { {0,1},{0,2},{0,4},{1,3},{1,5},{2,3},{2,6},{4,5},{4,6},{3,7},{5,7},{6,7} }; int xpts[] = new int[NN]; int ypts[] = new int[NN]; /* ----------------------------- applet control ------ */ public void init() { resize(630,320); setBackground(Color.white); dim = getSize(); imgOff = createImage(dim.width,dim.height); gOff = imgOff.getGraphics(); cvw = new Choice(); cvw.addItem("ph-0");cvw.addItem("ph-1");cvw.addItem("ph-2"); cvw.addItem("ph-3");cvw.addItem("ph-4");cvw.addItem("ph-5"); cvw.addItemListener(this); cvw.select("ph-0"); ch_md = new Choice(); ch_md.addItem("density");ch_md.addItem("phase");ch_md.addItem("ph-grid"); ch_md.addItem("Vext"); ch_md.addItem("VH"); ch_md.addItem("Vx"); ch_md.addItem("Vc"); ch_md.addItem("Veff"); ch_md.addItem("rho"); ch_md.addItem("rho 3D"); ch_md.addItemListener(this); ch_md.select("phase"); ch_noe = new Choice(); ch_noe.addItem("n=0.5(H)");ch_noe.addItem("n=1(H)"); ch_noe.addItem("n=1.5(He)");ch_noe.addItem("n=2(He)"); ch_noe.addItem("n=2.5(Li)");ch_noe.addItem("n=3(Li)"); ch_noe.addItem("n=3.5(Be)");ch_noe.addItem("n=4(Be)"); ch_noe.addItem("n=4.5(B)");ch_noe.addItem("n=5(B)"); ch_noe.addItem("n=5.5(C)");ch_noe.addItem("n=6(C)"); ch_noe.addItem("n=6.5(N)");ch_noe.addItem("n=7(N)"); ch_noe.addItem("n=7.5(O)");ch_noe.addItem("n=8(O)"); ch_noe.addItem("n=8.5(F)");ch_noe.addItem("n=9(F)"); ch_noe.addItem("n=9.5(Ne)");ch_noe.addItem("n=10(Ne)"); ch_noe.addItemListener(this); ch_noe.select("n=5.5(C)"); bt_reset= new Button("reset"); bt_reset.addActionListener(this); bt_start= new Button("start"); bt_start.addActionListener(this); bt_stop = new Button("stop"); bt_stop.addActionListener(this); spx= new Scrollbar(Scrollbar.HORIZONTAL,50,10,0,110); spx.addAdjustmentListener(this); spy= new Scrollbar(Scrollbar.HORIZONTAL,0,10,0,110); spy.addAdjustmentListener(this); spz= new Scrollbar(Scrollbar.HORIZONTAL,0,10,0,110); spz.addAdjustmentListener(this); addMouseListener(this); addMouseMotionListener(this); setLayout(new BorderLayout()); Panel pnl = new Panel(); pnl.setLayout(new GridLayout(1,6,5,0)); pnl.add(bt_reset); pnl.add(bt_start); pnl.add(bt_stop); pnl.add(ch_noe); pnl.add(cvw); pnl.add(ch_md); add(pnl,"North"); setInitialCondition(); } public void start() { if (th == null) { th = new Thread(this); th.start(); } } public void stop() { if (th != null) { th.stop(); th = null; } } public void itemStateChanged(ItemEvent ev){ if (ev.getSource() == cvw){ dispObj = cvw.getSelectedIndex(); } else if (ev.getSource() == ch_md){ dispMode = ch_md.getSelectedIndex(); } else if (ev.getSource() == ch_noe){ NOE = 0.5+0.5*ch_noe.getSelectedIndex(); Znuc = Math.floor(NOE+0.6); setPotential(); setOccupation(); } } public void actionPerformed(ActionEvent ev){ if(ev.getSource() == bt_reset){ started = -1; } else if(ev.getSource() == bt_start){ started = 1; } else if(ev.getSource() == bt_stop){ started = 0; } } public void adjustmentValueChanged(AdjustmentEvent ev){ if (ev.getSource() == spx) { px0 = 0.1*(double)(spx.getValue()); } else if (ev.getSource() == spy) { py0 = 0.1*(double)(spy.getValue()); } else if (ev.getSource() == spz) { pz0 = 0.1*(double)(spz.getValue()); } } public void mousePressed(MouseEvent ev){ } public void mouseReleased(MouseEvent ev){ dgXb = 0; dgYb = 0; dgX = 0; dgY = 0; } public void mouseClicked(MouseEvent ev){ } public void mouseEntered(MouseEvent ev){ } public void mouseExited (MouseEvent ev){ } public void mouseMoved (MouseEvent ev){ } public void mouseDragged(MouseEvent ev){ dgXb = dgX; dgYb = dgY; dgX=ev.getX(); dgY=ev.getY(); if (dgXb==0 && dgYb==0) { dgXb = dgX; dgYb = dgY; } viewTheta += 0.5*3.14/180.0*(dgX-dgXb); viewFai += 0.5*3.14/180.0*(dgY-dgYb); cosTh = Math.cos(viewTheta); sinTh = Math.sin(viewTheta); cosFi = Math.cos(viewFai); sinFi = Math.sin(viewFai); } public void run() { while (th != null) { try { timeEvolution(); offPaint(); repaint(); Thread.sleep(sleepTime); } catch (InterruptedException e) { } } } public void update(Graphics g) { paint(g); } public void paint(Graphics g) { g.drawImage(imgOff,0,0,this); } /* ----------------------------- offPaint -------------------- */ void offPaint() { int i,gb; double ev,ek; double dens; gOff.setColor(Color.white); gOff.fillRect(0,0,dim.width,dim.height); dens = 500.0; if (dispMode==0 || dispMode==1) { boxPlot(); dens3DPlotSD(dens,dispMode,dispObj); boxPlot2(); } else if (dispMode==2) { gridFnPlot(sdState[dispObj], NNz/2, 50.0); } else if (dispMode==3) { gridFnPlot(vvext, NNz/2, 5.0); } else if (dispMode==4) { gridFnPlot(vvh, NNz/2, 5.0); } else if (dispMode==5) { gridFnPlot(vvx, NNz/2, 5.0); } else if (dispMode==6) { gridFnPlot(vvc, NNz/2, 5.0); } else if (dispMode==7) { gridFnPlot(vv, NNz/2, 5.0); } else if (dispMode==8) { gridFnPlot(rho, NNz/2, 5.0); } else if (dispMode==9) { boxPlot(); rho3DPlot(50.0); boxPlot2(); } gOff.setColor(Color.black); gOff.drawString("jellium core all-electron (Z="+Znuc+" n="+NOE+") ",30,40); gOff.drawString("No.of electron",630/6*3+10,40); gOff.drawString("object",630/6*4+10,40); gOff.drawString("view",630/6*5+10,40); gb = 400; gOff.setColor(Color.black); gOff.drawString("box="+(int)(NNx*dx)+"x"+ +(int)(NNy*dy)+"x"+(int)(NNz*dz)+" au",gb,60); gOff.drawString("dx="+(int)(dx*100.0)/100.0+" au",gb,80); gOff.drawString("V(r)=-Z/r (r>=R, R=0.2)",gb,100); gOff.drawString(" = -Z/R *(1.5-0.5*(r/R)^2) (else)",gb,120); for (i=0; i<6; i++) { if (occ[i]>0.0) { gOff.setColor(Color.red); } else { gOff.setColor(Color.blue); } gOff.drawString("n["+i+"]="+(int)(occ[i]*100.0)/100.0+"",gb-80,220+15*i); gOff.drawString("E["+i+"]="+(float)(sdEnergy[i])+"",gb,220+15*i); } } /*------------------------------- plot methods ------------*/ void rho3DPlot(double weight) { int i,j,k,ix,iy,ir; int gbx,gby; double cxx,cyy,czz; double z,ppx,ppy,ppz; double mag,dens,col; gbx = 60; gby = 80; mag = 3.0; cxx = mag*(NNx/2.0); cyy = mag*(NNy/2.0); czz = mag*(NNz/2.0); for (i=1; i0) { if (ir>10) { ir = 10; } z = k*mag; ppy = cosFi*(j*mag-cyy)+sinFi*(z-czz) + cyy; ppz = -sinFi*(j*mag-cyy)+cosFi*(z-czz) + czz; ppx = cosTh*(i*mag-cxx)+sinTh*(ppz-czz) + cxx; ppz = -sinTh*(i*mag-cxx)+cosTh*(ppz-czz) + czz; ix = (int)(ppx)+gbx; iy = (int)(ppy)+gby; gOff.setColor(Color.getHSBColor((float)(0.66-0.66*dens), 0.9f,0.9f)); gOff.fillOval(ix-ir/2,iy-ir/2,ir,ir); } } } } } void dens3DPlotSD(double weight,int mode, int istate) { int i,j,k,ix,iy,ir; int gbx,gby; double cxx,cyy,czz; double z,ppx,ppy,ppz; double mag,dens,col; gbx = 60; gby = 80; mag = 3.0; cxx = mag*(NNx/2.0); cyy = mag*(NNy/2.0); czz = mag*(NNz/2.0); for (i=1; i0) { if (ir>10) { ir = 10; } z = k*mag; ppy = cosFi*(j*mag-cyy)+sinFi*(z-czz) + cyy; ppz = -sinFi*(j*mag-cyy)+cosFi*(z-czz) + czz; ppx = cosTh*(i*mag-cxx)+sinTh*(ppz-czz) + cxx; ppz = -sinTh*(i*mag-cxx)+cosTh*(ppz-czz) + czz; ix = (int)(ppx)+gbx; iy = (int)(ppy)+gby; col = 0.0; if (mode==0) { col = 0.66 -0.05*dens; if (col<0.0) { col = 0.0; } } else if (mode==1) { if (sdState[istate][i][j][k]>=0) { col = 0.33; } else { col = 0.01; } } gOff.setColor(Color.getHSBColor((float)col, (float)(0.3+0.3*occ[istate]),0.9f)); gOff.fillOval(ix-ir/2,iy-ir/2,ir,ir); } } } } } void gridFnPlot(double fn[][][], int zPos, double weight) { int i,j,k,gbx,gby; int cx,cy,cz; double z,px,py,pz,sc; double ph2; cx = NNx/2; cy = NNy/2; cz = 0; sc = 4.0; gbx = 30+(int)(cx/sc); gby = 20+(int)(cy/sc); k = zPos; for(j=0; jsdEnergy[ist+1]+0.001) { for (i=1;i=1.0) { ec = -0.1423/(1.0+1.0529*Math.sqrt(r)+0.3334*r); } else { ec = -0.0480-0.0116*r+(0.0311+0.0020*r)*Math.log(r); } return ( ec ); } /* ----------------- Gram-Schmidt --------- */ void GramSchmidt(int stateMax) { int i,j,k,ist,istate; double s; normalize(sdState[0]); for (istate=1; istate